methylcheck.plot_beta_by_type

methylcheck.plot_beta_by_type(beta_df, probe_type='all', return_fig=False, silent=False, on_lambda=False)

compare betas for type I and II probes – (inspired by the plotBetasByType() function)

Plot the overall density distribution of beta values and the density distributions of the Infinium I or II probe types 1 distribution plot; user defines type (I or II infinium)

Doesn’t work with 27k arrays because they are all of the same type, Infinium Type I.

options:

return_fig: (default False) if True, returns a list of figure objects instead of showing plots.