methylcheck.mean_beta_plot

methylcheck.mean_beta_plot(df, verbose=False, save=False, silent=False)

Returns a plot of the average beta values for all probes in a batch of samples.

Input (df):
  • a dataframe with probes in rows and sample_ids in columns.
  • to get this formatted import, use methylprep.consolidate_values_for_sheet(),

as this will return a matrix of beta-values for a batch of samples (by default).