methylcheck.cli |
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methylcheck.run_pipeline |
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methylcheck.run_qc |
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methylcheck.read_geo |
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methylcheck.load |
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methylcheck.load_both |
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methylcheck.qc_signal_intensity |
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methylcheck.plot_M_vs_U |
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methylcheck.plot_controls |
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methylcheck.plot_beta_by_type |
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methylcheck.probes |
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methylcheck.list_problem_probes |
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methylcheck.exclude_probes |
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methylcheck.exclude_sex_control_probes |
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methylcheck.drop_nan_probes |
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methylcheck.samples |
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methylcheck.sample_plot |
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methylcheck.beta_density_plot |
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methylcheck.mean_beta_plot |
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methylcheck.mean_beta_compare |
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methylcheck.beta_mds_plot |
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methylcheck.combine_mds |
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methylcheck.cumulative_sum_beta_distribution |
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methylcheck.predict |
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methylcheck.get_sex |
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methylcheck.assign |
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